Browse of TCMCG017C19909 protein

CDS

Accession Number	TCMCG017C19909
gbkey	CDS
Protein Id	OMO84284.1
Location	complement(join(11858..12067,12246..12405,12489..12552,12784..13068,13184..13286,13414..13517,13959..14154,14316..15017))
GeneID	InterPro:IPR003890
Organism	Corchorus olitorius
locus_tag	COLO4_22130

Protein

Length	607aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01017856.1
Definition	MIF4G-like, type 3 [Corchorus olitorius]
Locus_tag	COLO4_22130

EGGNOG-MAPPER Annotation

COG_category	K
Description	Pre-mRNA-splicing factor CWC22 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K13100        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000375        [VIEW IN EMBL-EBI] GO:0000377        [VIEW IN EMBL-EBI] GO:0000398        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005681        [VIEW IN EMBL-EBI] GO:0005684        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071006        [VIEW IN EMBL-EBI] GO:0071012        [VIEW IN EMBL-EBI] GO:0071013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCCTTCACCTAGTAGAGATAGAAAGCGAGAAAAAGGCAGAATTCGTGATGATGATGATGATAGGAGTAGGTGGAGAGGTATAGCCGAGAAGCGAGCCAAGAGAGTTAAGAGAGGGGAAAGGGATACAAGTACTAGGCATGATCGCAGATGGCGGGAATCTGAAGAAGATAGGTATGCACATAGGTATAGGGGGCATGGAAAATCAGAACGTAAGAATAAGAGTGATGGAAGAGGCCGTGGTAATCAGCCAAGTCGTAGAAGCAGGGATCATAAGGAGAAAGAGGAAGGGGGAATCGAACAGAAAGAACCAGCTTTGCAACAAACCAACTTGTTTGGCAATGCAGCTTATATTCCTCCATTTACATTAGCAAGAATGATGAAAGAGACACAAGATAAGAGCAGTGTTGAATATCAGCGATTAACTTGGGATGCACTTAGAAAAAGTATCAATGGACTTGTTAACAAAGTCAATGCTACTAATATAAAGCATATTATTCCTGAACTCTTTGCTGAGAATCTTATTCGAGGAAGGGGTCTCTTCTGTCGTTCATGTATGAAATCTCAGATGGCATCTCCTTGTTTCACAGATGTTTTTGCTGCATTGGTGGCTGTTGTTAATACCAAGTTCCCTGAGGTGGGAGCTTTATTGTTGAGAAGGATCGTTTTGCAGCTTAAGAGAGCATATAAGCGGAATGACAAGCAAGTGGCTCACGAGATTATTGCTTTGGAACTGCTCACTTTTTTGCTGGAGAATCCTACTGATGGTAGTGTTGAGGTTGCTGTTGGTTTTGTTACTGAGTGTGGATCATTACTTCAGGATCTTTCGCCAAAAGGCCTACACGGCGAGTGTTACTCTTTGAACTATGTATGGATCAATACAGTAGTTCTACTTCTCTGTATTTTTGAGCGTTTTCGGGGGATTCTTCATGAAGGAGAGATAGATAAACGTGTTCAATTTCTGATAGAGGGCTTATTTGCTATAAGGAAAGCCAAGTTTCAGGGGTACCCCGCTGTTCGTCCAGAACTAGACCTTGTTGAGCAGGAGGACCAATTAACTCATGAAATCTCTCTCCGAGATGAGATAGATCCTGAAATTGCCCTTGACATCTTTAAAGCAGATTTTCATTTTTTGGAGAATGAAAAACTCTATGAAGAGTTGAAGAAAACTATCCTCGGTGGGGGATCCGAGGATGAAGAGGCTTCTGATGCGGCTTCAGGTGAGGATGAGGATGAGGATGACAATGAAGATGAGGAGGAGCAGATGAAAATAAGAGACGAGACAGGGGCAAATCTTGTAAATCTTAGGAGGACAATCTACCAGACCATCAAGTCCTGTTTACATTCTGATGCGGCTGGCCACAAGCTCCTGAAAATTAAGCTTCAGCCAGATGGAGTTATGCAATATGATCTTGGAGTGCTGCAGTCACGAGAAATCTTGGAATTCATTTTATGGGTTCATCATCTTGAAACAGACAAGTTACGTAATGTGGCGAAGTTTTTTGCACATTTACTTGCCACGGATGCTTTGCCCTGGCATGTTCTAGGCTATACACGATTAACTGAGGAGAATACAACATCGTCATCCCGAATATTTGTCAAGATTCTCTTCCAGGAACTGTCGGAGCATCTTGGAATTTGCAAATTGAAGGAGCGGCTTTCAGTTCCCACAATGCAGGATTCATTTGAATCAATTTTCCCGAAAGATAATCTAAAGAACACACGATTTTCTATCAACTTTTTTACCTGCATTGGGCTTGGTGGCATCACTGAGAATTTGCGCGAGTATTTGAAGAACATGCCAGTGCCACGGCCTATCATGTAA

Protein:   MPSPSRDRKREKGRIRDDDDDRSRWRGIAEKRAKRVKRGERDTSTRHDRRWRESEEDRYAHRYRGHGKSERKNKSDGRGRGNQPSRRSRDHKEKEEGGIEQKEPALQQTNLFGNAAYIPPFTLARMMKETQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKHIIPELFAENLIRGRGLFCRSCMKSQMASPCFTDVFAALVAVVNTKFPEVGALLLRRIVLQLKRAYKRNDKQVAHEIIALELLTFLLENPTDGSVEVAVGFVTECGSLLQDLSPKGLHGECYSLNYVWINTVVLLLCIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLRDEIDPEIALDIFKADFHFLENEKLYEELKKTILGGGSEDEEASDAASGEDEDEDDNEDEEEQMKIRDETGANLVNLRRTIYQTIKSCLHSDAAGHKLLKIKLQPDGVMQYDLGVLQSREILEFILWVHHLETDKLRNVAKFFAHLLATDALPWHVLGYTRLTEENTTSSSRIFVKILFQELSEHLGICKLKERLSVPTMQDSFESIFPKDNLKNTRFSINFFTCIGLGGITENLREYLKNMPVPRPIM